[WPS] 2023.08 W1

  1. Spatial transcriptomics combined with single‐cell RNA‐sequencing unravels the complex inflammatory cell network in atopic dermatitis – Mitamura – 2023 – Allergy – Wiley Online Library
  2. Clonal expansion of intra‐epithelial T cells in breast cancer revealed by spatial transcriptomics – Romanens – International Journal of Cancer – Wiley Online Library
  3. Sublethal necroptosis signaling promotes inflammation and liver cancer (cell.com)
  4. Proteomic Dynamics of Breast Cancer Cell Lines Identifies Potential Therapeutic Protein Targets – ScienceDirect
  5. The Utility of Spatial Transcriptomics for Solid Organ Trans… : Transplantation (lww.com)
  6. Expansion spatial transcriptomics | Nature Methods
  7. Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks (cell.com)
  8. Expansion spatial transcriptomics | Nature Methods
  9. PhenoScore quantifies phenotypic variation for rare genetic diseases by combining facial analysis with other clinical features using a machine-learning framework | Nature Genetics
  10. Somatic mutations in facial skin from countries of contrasting skin cancer risk | Nature Genetics
  11. Pharmacological targeting of netrin-1 inhibits EMT in cancer | Nature
  12. Systematic benchmarking of single-cell ATAC-sequencing protocols | Nature Biotechnology
  13. DeepTraSynergy: drug combinations using multimodal deep learning with transformers | Bioinformatics | Oxford Academic (oup.com)
  14. AtlasXplore: a web platform for visualizing and sharing spatial epigenome data | Bioinformatics | Oxford Academic (oup.com)
  15. Single-cell Hi-C data enhancement with deep residual and generative adversarial networks | Bioinformatics | Oxford Academic (oup.com)
  16. LegNet: a best-in-class deep learning model for short DNA regulatory regions | Bioinformatics | Oxford Academic (oup.com)
  17. .simCAS: an embedding-based method for simulating single-cell chromatin accessibility sequencing data | Bioinformatics | Oxford Academic (oup.com)
  18. Genetic effects on molecular network states explain complex traits | Molecular Systems Biology (embopress.org)
  19. System‐wide optimization of an orthogonal translation system with enhanced biological tolerance | Molecular Systems Biology (embopress.org)
  20. Predicting molecular mechanisms of hereditary diseases by using their tissue‐selective manifestation | Molecular Systems Biology (embopress.org)

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