[WPS] 2023.10 W4

  1. CellNeighborEX: deciphering neighbor‐dependent gene expression from spatial transcriptomics data | Molecular Systems Biology (embopress.org)
  2. Dimensionality reduction methods for extracting functional networks from large‐scale CRISPR screens | Molecular Systems Biology (embopress.org)
  3. Rare variants with large effects provide functional insights into the pathology of migraine subtypes, with and without aura | Nature Genetics
  4. Effects of psoriasis and psoralen exposure on the somatic mutation landscape of the skin | Nature Genetics
  5. Liquid-biopsy proteomics combined with AI identifies cellular drivers of eye aging and disease in vivo: Cell
  6. Liquid-biopsy proteomics combined with AI identifies cellular drivers of eye aging and disease in vivo: Cell
  7. RSim: A reference-based normalization method via rank similarity | PLOS Computational Biology
  8. Predicting the target landscape of kinase inhibitors using 3D convolutional neural networks | PLOS Computational Biology
  9. Pathfinder: Protein folding pathway prediction based on conformational sampling | PLOS Computational Biology
  10. Genetic vulnerability to Crohn’s disease reveals a spatially resolved epithelial restitution program | Science Translational Medicine
  11. Dual-modality imaging of immunofluorescence and imaging mass cytometry for whole-slide imaging and accurate segmentation – ScienceDirect
  12. Chromatin accessibility profiling of targeted cell populations with laser capture microdissection coupled to ATAC-seq – ScienceDirect
  13. Single-cell morphological and topological atlas reveals the ecosystem diversity of human breast cancer | Nature Communications

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